Detailed information of HSymV2.0_g10.18101_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_10:10725900...10741775
NR annotation: XP_047134779.1, liprin-alpha-1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q13136Liprin-alpha-1 OS=Homo sapiens OX=9606 GN=PPFIA1 PE=1 SV=1
O75335Liprin-alpha-4 OS=Homo sapiens OX=9606 GN=PPFIA4 PE=1 SV=3
Q91Z79Liprin-alpha-3 OS=Rattus norvegicus OX=10116 GN=Ppfia3 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR037620DomainLiprin-alpha, SAM domain repeat 1Interproscan
IPR037622DomainLiprin-alpha, SAM domain repeat 3Interproscan
IPR001660DomainSterile alpha motif domainInterproscan
IPR029515FamilyLAR-interacting protein, LiprinInterproscan
IPR037621DomainLiprin-alpha, SAM domain repeat 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12587LAR INTERACTING PROTEIN LIP -RELATED PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0048786Cellular Componentpresynaptic active zoneInterproscan
GO:0050808Biological Processsynapse organizationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K26226PPFIA; liprin-alpha-Membrane traffickingko04131deepkoala

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