Detailed information of HSymV2.0_g10.19002_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_10:24177807...24228582
NR annotation: XP_047134102.1, histone-lysine N-methyltransferase SETDB1 isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O88974Histone-lysine N-methyltransferase SETDB1 OS=Mus musculus OX=10090 GN=Setdb1 PE=1 SV=1
Q15047Histone-lysine N-methyltransferase SETDB1 OS=Homo sapiens OX=9606 GN=SETDB1 PE=1 SV=1
Q08BR4Histone-lysine N-methyltransferase SETDB1-B OS=Danio rerio OX=7955 GN=setdb1b PE=2 SV=2
Gene familySubfamily
Transcription Factors FamilyMBD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18358Tudor_4Histone methyltransferase Tudor domainDomainInterproscan
PF11799IMS_CimpB/mucB/samB family C-terminal domainDomainInterproscan
PF16727REV1_CDNA repair protein REV1 C-terminal domainDomainInterproscan
PF14377UBMUbiquitin binding regionMotifInterproscan
PF05033Pre-SETPre-SET motifFamilyInterproscan
PF00817IMSimpB/mucB/samB familyFamilyInterproscan
PF18359Tudor_5Histone methyltransferase Tudor domain 1DomainInterproscan
PF16589BRCT_2BRCT domain, a BRCA1 C-terminus domainFamilyInterproscan
PF11798IMS_HHHIMS family HHH motifMotifInterproscan
PF00856SETSET domainFamilyInterproscan
PF01429MBDMethyl-CpG binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR046341Homologous_superfamilySET domain superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR001214DomainSET domainInterproscan
IPR001357DomainBRCT domainInterproscan
IPR041292DomainHistone methyltransferase, Tudor domain 2Interproscan
IPR001739DomainMethyl-CpG DNA bindingInterproscan
IPR038401Homologous_superfamilyRev1, C-terminal domain superfamilyInterproscan
IPR003616DomainPost-SET domainInterproscan
IPR017961DomainDNA polymerase, Y-family, little finger domainInterproscan
IPR031991DomainDNA repair protein Rev1, C-terminalInterproscan
IPR036775Homologous_superfamilyDNA polymerase, Y-family, little finger domain superfamilyInterproscan
IPR007728DomainPre-SET domainInterproscan
IPR025527Conserved_siteHUWE1/REV1, ubiquitin-binding motifInterproscan
IPR001126DomainUmuC domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR041291DomainHistone methyltransferase, Tudor domain 1Interproscan
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR024728Conserved_siteDNA polymerase type-Y, HhH motifInterproscan
IPR016177Homologous_superfamilyDNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45990DNA REPAIR PROTEIN REV1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0017125Molecular Functiondeoxycytidyl transferase activityInterproscan
GO:0042276Biological Processerror-prone translesion synthesisInterproscan
GO:0070987Biological Processerror-free translesion synthesisInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0042054Molecular Functionhistone methyltransferase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03515REV1; DNA repair protein REV1EC:2.7.7.-
DNA repair and recombination proteinsko03400deepkoala

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