Gene detail

Detailed information of HSymV2.0_g10.19086_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_10:25254969...25270730
NR annotation: XP_047134970.1, glomulin isoform X1 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

HSymV2.0_g10.19086_t1

AGAAAAATGATAATTTTAGATGGAAGATTGTGAATTTTTGGTTCAGTGCAAAGTTTTGGTTGAAGAAAGAAAAGTTGATGATTTGCTGTTGATACTAAAGAATAGTGATAACAATGAGCGTATTTCATATTGTGGATGGGAACTTGTTGGCATTTTTTTTCAACATCTAAACCAATTTAGTGAAGAGGAAGTAACTGCCATCAAGTCATGCTTAAATGTCTTATTGGAGGTTTGCAGTTCTAAAGAAATGATACTAGCATTAGTAGAACAGATCTCCTCCTTAACCTCCTTCAAAGACGTTGTTATTCTTGTTGATGCGTGTTCTCAAACTCTTTTGAAGTTGAAAAGCAAACAGTCCATTCATCTTGAAGATGTGACAAAGGAAATAACCAAATATATGGAAAATGCTTTGTCAGATAAAGACAGTGTGGAAGCAGAAGAAGAGTATGAGCATAGTGACACAAAAGATGAACTTGAAACAATGTATGATTGCATATGCAAGTTTACATCAACCATGGTGGCAAAAGTTCAAAGAAGGAAGTGTGTGAACGTGGATGATCTATATAGCGAAACAACATCAAATGATTGGTGTGAATATGAAATCACACAAAGTAGAAATATTTTGTTTCAGTTTCTGTTGTGTTTTTTAGGCATCCTAGTGAAGAAGAATATCCTTTTCAGTTTCCATGGTGACTGGAATAAAATAACGATGGGTGTCCATGATTTGATGTCGTTTTCTCAACTGCTTGAACATATAGCGAAAGAAAATTTGCATCTTGATTCTGTTGGATTTGTGGCATTTCTTCATATCACTTTTGTTCAGTCAATTCAAGTTGATCAATTTCCTGTGGTGTATAGATGTGACACTCTGTTTCAACTAGCCTCTCGACATATAGCTGAAACTCTTCGAATATCTGCAGATGATTCAGTGAGGATGTCTCTGGATTTATTAAATTTTTTATTGAAACCGCTGGAAGATAAAATCTTCTCTCGAGTGGCTGTTGAAACATTTTCAAAAATTGCACTAGGGTTATCAAACGTAATGATATGGTGTCAGCAGGAAAAGCTGAGACAGAACGCTAAAGAAATTTTCTCTTTATATCTGCTAAAAATACAAACAATAGACAAATATCTGATATTGAGATCTGTGTACGACCAGTCTCAACATGCAGGCTTACGTGGTTATTTGATCAAATTCATCACAACTGCGCTAGTGGAATTTTATGATATGAACGAGGATGTATACGTGAAGGATGTCTCGACACTTGCACTCTCGTATACAGAGTTGGTGTTAGGTGAAAGTAACATACTGAACGAATCAGACAGACTTATGGCTGGCCTAAACTTTGTGCGTTTTTGGTTGTTAAAAGATCCTCGAAACGAAAACAAGACTGGTGTGTGGAACCTGAAAGATTTGTTGAGAAGAAATTTTCAAGTCATCCGAAAGTGCGCTGATGTTTCAAAGCTGGAATTGGAAAGCGCGTTGCAAAATGTTGAAAACACGTCTTGCGAGGAAATGATTGAAGTTGTCATTCCTGGTGGCGAAGCCGTCAAGAATTTTTCACAGAGTCAAAAATATGACGTTATTCAAGCCGCCTCAGTGTGTTTAGATCTAATGCTTAGCATCGTCGCCGTAATAGACAAGACCCTTACCTGGCACTCTTTTCTATCTGAAAAAGACGAATTAGTGACATCAAGTAAGACTTAATTGAAAACTTTAGCTGTCGAGACCACTATCGTGAGAAATGAAAGCCGGCAGAGGAAGTAACGTAATTTACTTTAAAAACATAAGCAGACAGACATTTATTATTAGGACTTTGTTACCAATAATGTTTTATTAGAAATCAGATCAGATCAATAGCTTTGATTTATATTTGTTAGTCATAATGTGACGTAATATATGTTTtttgttcaccatattttcacgtgttttttttttaattgttattaaaagtaaagtaacacaagaaatttaggctctttggaagttacataaaatggggcggaaagttcacgttttggtgttcccgaaggtgaaagtttgagaattttctcctgcgcctGTGATCCTATCATTTTCGGTCCTCTTACGTCACTATATCTGGCCCCTTCTGGCCTCTCCACCTGTATTATTCCATCGGCGGCCTTGGAATTTAAAGGGCTGAGATTATATGTGGATAAACTCGAAAGAAAAATAATTTTTTTTTAAATTTTAATTTTAAGCCCACACTTGGCGGGTTATTTTTTTATAAGCATTTTAAACTTTGGTTAAAATGAACCAAAAGACATTGATTATGAGTTTGTTTTGTTGTTTTTCCAGACGAGAACTTCTTTCATCTTCCAACAGAATGCTTTTAAAGTTGTTTAGGTTCGAGTTGGTTCATTCTAACGTTTACTTTAAAATATGTAAAGAAAATATTATTAATAAAAAAAAT

Protein

Uniprot

Uniprot term	Description
Q92990	Glomulin OS=Homo sapiens OX=9606 GN=GLMN PE=1 SV=2
Q8BZM1	Glomulin OS=Mus musculus OX=10090 GN=Glmn PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08568	Kinetochor_Ybp2	Uncharacterised protein family, YAP/Alf4/glomulin	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013877	Family	YAP-binding/ALF4/Glomulin	Interproscan
IPR019516	Family	Glomulin/ALF4	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15430	GLOMULIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0055105	Molecular Function	ubiquitin-protein transferase inhibitor activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23345	GLMN; glomulin	-	Ubiquitin system	ko04121	deepkoala