Gene detail

Detailed information of HSymV2.0_g10.19202_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_10:26417797...26423162
NR annotation: XP_047135748.1, nonsense-mediated mRNA decay factor SMG7 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q1LVF3	Nonsense-mediated mRNA decay factor SMG7 OS=Danio rerio OX=7955 GN=smg7 PE=2 SV=2
Q92540	Nonsense-mediated mRNA decay factor SMG7 OS=Homo sapiens OX=9606 GN=SMG7 PE=1 SV=2
Q5RJH6	Nonsense-mediated mRNA decay factor SMG7 OS=Mus musculus OX=10090 GN=Smg7 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR045153	Family	Est1/Ebs1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15696	SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000184	Biological Process	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Interproscan
GO:0005697	Cellular Component	telomerase holoenzyme complex	Interproscan
GO:0042162	Molecular Function	telomeric DNA binding	Interproscan
GO:0070034	Molecular Function	telomerase RNA binding	Interproscan