Detailed information of HSymV2.0_g11.19649_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_11:9960085...9969656
NR annotation: RMX59601.1, hypothetical protein pdam_00003620 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A9JTG5RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Danio rerio OX=7955 GN=rbck1 PE=2 SV=1
Q62921RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Rbck1 PE=1 SV=3
Q9WUB0RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Mus musculus OX=10090 GN=Rbck1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan
PF00240ubiquitinUbiquitin familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR047557DomainHeme-oxidized IRP2 ubiquitin ligase 1, Rcat domainInterproscan
IPR051628FamilyLinear Ubiquitination-Associated E3 LigasesInterproscan
IPR001876DomainZinc finger, RanBP2-typeInterproscan
IPR000626DomainUbiquitin-like domainInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR044066DomainTRIAD supradomainInterproscan
IPR047559DomainHeme-oxidized IRP2 ubiquitin ligase 1, modified RING finger, HC subclassInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR036443Homologous_superfamilyZinc finger, RanBP2-type superfamilyInterproscan
IPR047558DomainHeme-oxidized IRP2 ubiquitin ligase 1, BRcat domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22770UBIQUITIN CONJUGATING ENZYME 7 INTERACTING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000151Cellular Componentubiquitin ligase complexInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0097039Biological Processprotein linear polyubiquitinationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10630RBCK1, HOIL1; RanBP-type and C3HC4-type zinc finger-containing protein 1EC:2.3.2.31
Ubiquitin systemko04121deepkoala

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