Gene detail

Detailed information of HSymV2.0_g11.19707_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_11:10705480...10728368
NR annotation: XP_047130669.1, purine nucleoside phosphorylase-like [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

HSymV2.0_g11.19707_t1

ATGCCAGAACAAAATTCATTACTTCAGAAATATGAACAAGATCAGCCACACAATGCAAAACTGAGTGGCTTGTTTATTGAAGAGCAAACCAAACTTGCTGGGCATGGTTGGAACATTTCTTGTCTTCAATTTAGTCAAAATGGTTTATACTTAGCATCTGGAAGTTGGGATAAAAATGTATTTATATGGGATTTAAGAACTCTGGATGCACCAAAGGTTTTGGATGGTGAGGGGGAAGGTCATACCTCTGCTGTTACGTCCTTATGTTGGCTACCAAATATTGAATTTTTGTTAGCATCAGCATCTGCTGACCATTCAATATTGATATGGAATTCAGATACTGGTGATGTAATGGCTAGATTGATGCAACACCAATCATGGGTGTTAGGGACCACATTTACCGCTGATGGTAAAATTTTGGCATCATCATCCTGGAATGGTAGTGTTATATTATGGGATATGAATATGCTAAAACCTGCAAATCAACTTGTTGGACACTCTGCTGGCGTCTGGGCTTGCTCTTTTGATAATAACTCTGCTGCTCCCATCTTGTGTACTGCCAGTGAAGATACGTCAATTAGATTATGGGACATGCGCACTGATCACAATTGGCATTCTGATGTATTACTTTCTGGAGTGCATGCAGATGCGATCAAATGCTGCTGTTGGTCACCATGTAGTAACTACTTAGCTGCCGGTTCGAAAGACGCTAAGATTTCCATATGGGATGTTCGTGCCAACAAAGCCATTAATTGTTTGCAAGGTCACACAGCAGAAGTTTCAAACGTTGAATTCATGTCTTCCTCTTCAAATTTGATTTTCTCTGTCGGAGATACACAATGCTGCTTGTGGAATATTTTTAATCCACAAGGAGATCCCGTTTGCTTTTTGAAACAGCACCTTTGGAGTTATGAGGTCGAGTCTCTTGCATTGTCTCCTGACGCCACACTTCTTGCAACTGGTAGTGTTGACAAACAGATCACTTTATCAACGATTGACATCACTGAAGAATTCTATGATACACTTCAGTCAGATGTTAACACGCTTCCATATGCACAAATGCCTGTAAAAACACAGTCTTCGTCTTCTTTACCTTCTCTAGGGAATGAGTCGTCGGCGTCTGTTCTAGACAAGGCTAAAACAGACAATCAAATCAAGCTGAAAGAAATGACCAAGCTGACTGCCAAACAGACCATTCGAATCAAAGCGCCAGTCACGTCGGCTTTGCTTCAAGACAAAAGGTCGAAATTAAAAACGGTGAAGTCACATGAGAGCATCAACGACTTGTTTCAAGGATTAAAATTACCAACAGCCGTGGATGAAGGGAGTATGCGTTTCAAATCAAAAGAATTATTGGCAGAGCGCAAAAAACTCCGTCCGACTAAATCCAATACGCAGAGCGATGTAAAAGATACAAGAAAATATACGCCATTACCGCCACCCAATGATGCAACACGAAATTCACTAATGTCGGAACTTCAAAGTAATTTTTTAAAACCACGGGGTAGTGTGACTTCAGAACACGCTCCCGTACGCCCAGAGAAATCAAGCAAAGAAAGCACAGCGGTGAAGAACATATCCCCTCCAGGCAGGCCAGAGCTTGCATTTCATTGTTGGAGTCTCTGGGCTGAAACCAAACTAAACGCAAGAGATTTAGTATTGAATAAATTATGGCAGAGAATTCTGGAAGTCACAAATTTGAAGATGTCGAAAAAATTAAAAATTTTCTCCTTGAAAAAACATCTTTTTAATTACGAAGACATTCCTGGTTTTCCTGTTAGCACAGTGAAAGGACATGCTGGTAAACTTGTGTTTGGAACATTAAGTGGAAAAACTGTTGTATGTTTGCAAGGTCGTTTTCATTTCTATGAAGGACACAGTATTTATAAGTGCACGCTTCCAGTCCGTGTCATGGCTGCACTTGGTATAAAAACATTAGTTGTAACAAATGCTGCAGGGGGTGTGAACAGAAGTTTTAACGTAGGTGATATTATGATTATCAAGGACCATATTGGCTTCCCTATGATGTCTGGTAATCACCCACTGGTTGGGTTAAATGATGACAGGCTTGGTCCAAGATTTCCATCCATGACTAGTATCTATGATAAGACCTTACAAACGAAAGCAAGTGATATTAGCAAAGAGTGTGGATATGGTGACTTCACTCGAAATGGTGTATACTGCATGTTAAGTGGACCCACGTATGAAACTCAGGCTGAGCTTCGTCTAGTACAGGCTGTTGGTGGGGATGCTGTGGGAATGAGCACCGTTCCTGAAGTGATTGTTGCTGCACACATGGATGTTAAAATTCTAGGCATCTCCCTAATAACTAATAAGTGTATTATGGAGTATGACACAAACGAGAAGCCGAATCATAAAGAAGTTTTGGAAGTTGGAAAACAGAGGTCTGAATGTGTGTTGGATATTGTAACGAAACTTATTGGAGCTATTTAA

Transcript

HSymV2.0_g11.19707_t1

Protein

Uniprot

Uniprot term	Description
P00491	Purine nucleoside phosphorylase OS=Homo sapiens OX=9606 GN=PNP PE=1 SV=2
P55859	Purine nucleoside phosphorylase OS=Bos taurus OX=9913 GN=PNP PE=1 SV=3
P23492	Purine nucleoside phosphorylase OS=Mus musculus OX=10090 GN=Pnp PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01048	PNP_UDP_1	Phosphorylase superfamily	Domain	Interproscan
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR035994	Homologous_superfamily	Nucleoside phosphorylase superfamily	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR018099	Conserved_site	Purine phosphorylase, family 2, conserved site	Interproscan
IPR011268	Family	Purine nucleoside phosphorylase	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR011270	Family	Purine nucleoside phosphorylase I, inosine/guanosine-specific	Interproscan
IPR020472	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR000845	Domain	Nucleoside phosphorylase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11904	METHYLTHIOADENOSINE/PURINE NUCLEOSIDE PHOSPHORYLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0009116	Biological Process	nucleoside metabolic process	Interproscan
GO:0016763	Molecular Function	pentosyltransferase activity	Interproscan
GO:0004731	Molecular Function	purine-nucleoside phosphorylase activity	Interproscan
GO:0006139	Biological Process	nucleobase-containing compound metabolic process	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11293	HIRA, HIR1; protein HIRA/HIR1	-	Chromosome and associated proteins	ko03036	deepkoala