Gene detail

Detailed information of HSymV2.0_g11.19820_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_11:12047306...12055932
NR annotation: XP_047126641.1, negative elongation factor D-like [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A5GFY4	Negative elongation factor D OS=Sus scrofa OX=9823 GN=NELFCD PE=3 SV=1
Q922L6	Negative elongation factor D OS=Mus musculus OX=10090 GN=Nelfcd PE=1 SV=2
Q8IXH7	Negative elongation factor C/D OS=Homo sapiens OX=9606 GN=NELFCD PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04858	TH1	TH1 protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006942	Family	TH1 protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12144	NEGATIVE ELONGATION FACTOR D	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0032021	Cellular Component	NELF complex	Interproscan
GO:0034244	Biological Process	negative regulation of transcription elongation by RNA polymerase II	Interproscan
GO:0045892	Biological Process	negative regulation of DNA-templated transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15181	TH1L, NELFD; negative elongation factor C/D	-	Transcription machinery	ko03021	deepkoala