Detailed information of HSymV2.0_g11.19859_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_11:12492992...12497365
NR annotation: ADD22404.1, cnidarian egg lectin isoform d [Hydractinia echinata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q60519Semaphorin-5B OS=Mus musculus OX=10090 GN=Sema5b PE=2 SV=2
Q13591Semaphorin-5A OS=Homo sapiens OX=9606 GN=SEMA5A PE=1 SV=3
D3ZTD8Semaphorin-5A OS=Rattus norvegicus OX=10116 GN=Sema5a PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02140Gal_LectinGalactose binding lectin domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR000922DomainD-galactoside/L-rhamnose binding SUEL lectin domainInterproscan
IPR052065FamilyComplement and asymmetry regulatorInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR043159Homologous_superfamilyD-galactoside/L-rhamnose binding SUEL lectin domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22906PROPERDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0030246Molecular Functioncarbohydrate bindingInterproscan

TOP