Detailed information of HSymV2.0_g11.19871_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_11:12729584...12787113
NR annotation: XP_047130013.1, putative ATP-dependent RNA helicase TDRD12 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q4PHU9ATP-dependent RNA helicase DBP2 OS=Mycosarcoma maydis OX=5270 GN=DBP2 PE=3 SV=2
Q6FLF3ATP-dependent RNA helicase DBP2 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DBP2 PE=3 SV=1
Q4IF76ATP-dependent RNA helicase DBP2 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=DBP2 PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04969CSCS domainDomainInterproscan
PF00567TUDORTudor domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007052DomainCS domainInterproscan
IPR008978Homologous_superfamilyHSP20-like chaperoneInterproscan
IPR002999DomainTudor domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR035437Homologous_superfamilySNase-like, OB-fold superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22655UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0042078Biological Processgerm-line stem cell divisionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K18409TDRD12; ATP-dependent RNA helicase TDRD12EC:5.6.2.5
Chromosome and associated proteinsko03036deepkoala

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