Gene detail

Detailed information of HSymV2.0_g11.20115_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_11:20939131...20945883
NR annotation: XP_042562441.1, flavin-containing monooxygenase FMO GS-OX-like 4 isoform X1 [Clupea harengus]

Gene Structure

More details in Jbrowse

Sequence

CDS

HSymV2.0_g11.20115_t1

ATGAAAACAGTTGGTGTGGTTGGCAGTGGAGCTGCAGGGTTATGCGCCGCAAGACATTTATTGCGATCCAAATTAAAACCTATTTTATTCGAACAACAAGACTGTGTTGGTGGTACATGGGTGTATCAAGATGTTGATAAAAACAATTCTAAAGATGTGTTTTCAAGTATGTATAAGAACCTGAGAACAAATCAACCGAAAGAAATAATGGCATTTCCAGATTTCCCTTTCCCACAAAGTGATTCATCGTATGTTCACCATACGACTGTCCGAGATTATCTTCAACTTTACGCTCATCACTTTAACCTGCTCCATCACATTCGCTTTAATACGAAAGTGACACAAATATCTCCATGTTTTATGTCACAGAAGGAGCAGAGATTTGTGAAATGGAAAATCTTTTTCTCTGATCGCAGTGGTAAAGTTTCGTCAGAGGTCTTTGACGGTGTGGTAATATGCAACGGACATTATTCAGTTCCATCGTATCCCTGCGTTACTGGTTTGCAGCATTTCACTGGAAAAACCATGCACAGTCACTACTATCGTCATGCTGATGAATTTAAGGATTTAACGACGTTAATCCTAGGTGATGGACCATCCGGAAGCGATATCATGTTAGAGTTGTCAAAGCAATGCGCTTCGATTTATTTTAGTCACCGTGGTAATAAGACGCAGTCTACACTCCCTTTAAATGTCTATGAAGTGGACGACATAAGTCACGTGACTGAAGATGGTCGATTTGTCTTTAAAGATAACAATACAGCAGAAATTGATGTTTTTATACCCTGCACAGGGATATCGAAATGGAAAAGACACAAAGGTTATTGTGTGGTGAACCAACAAGGTAATATAATGATTGTGTATGTGGTAGCTATATTCTTGTTTGCACTGGTGGTATGGAAATTAACAAGACCGTTTCATTCTAACAGTAGAGATTCACCATCTGGACTGGATGCGTTGCGGTTACGACTATTTGTGGTGGGGATTACGAAGCTTCTTTTTATTATCGGAAAATTTACAACATGGTTAACCGGAAGTGATTTGTATGTTTTGGGGAATAATGTACCATGTAAACGAAAATCAAAAATGACGATTAATGGCGTCGATGTTTTTTACTTCAATCGACAAGCTAGCAAAAAACAGAATTGTTTTATTTTTATACATGGCGGAGCTTTTATTTTACCACATATCTATCCATATGACATGTGCTTGGGTTTTATTGCGAAGAAAACAAACGCTTTAGTTTTATCTATAGACTATCGTCTTGCTCCTGTACACACCTATCCAGCTGCGCATGATGACTGTTATAAAGCAGTTCACTATATACTCTCCAATCCTTCAGAATTTAATATCAACACTGATGGCATTGTCTTGTGCGGAGACAGTGTTGGTGGCAATCTCGTAGCGTGGACTTGTCTTCAGCTCGCAGAAAATCATCCACATCTTTCAGAGATGGTGAAAGTGCAGATATTAGTCAATCCATTGTTGCAGTGTGCTGATTTTTGTACCCCTTCCTATCAAGACGCAGCTAACTATTCAACATACCTTCCTCCATCACTGCTATCTCGATTAACTTCTGTATTTTTAACTGGTACGGATAAATACGCTCAGTTGTTCCTCACCAATAAGCTATCTGATCTCTTGCGAAATGGTGACTCCGAAGTAATCCGTAGGAAATGCAATATCCCAAGAAGTGTAATGGACCAGATCCTCGTTCCTTTTGTATCTGGGCTCTTTACACAGACTCTTCCATTGAATTACCCCCCGGTAAAATTGTTATCCTGTGAATTTGATGTATTACTCAGTGACAGTAAAATGTTTCATGATAAGCTGCTAGGTCAGAACTTGGAATCTACGTTGTTAGAATATAAGACTGTACATTGTGGGTTTTTATTTTCGATGGTGGGTAGAAGTGAAGATGTGAAAATGTTAAGAGATATCGTCCGTATTGCTGAATCAGCATTCGCAGCGCATAACTAG

Transcript

HSymV2.0_g11.20115_t1

Protein

Uniprot

Uniprot term	Description
A8MRX0	Flavin-containing monooxygenase FMO GS-OX5 OS=Arabidopsis thaliana OX=3702 GN=FMOGS-OX5 PE=1 SV=2
Q94BV5	Flavin-containing monooxygenase FMO GS-OX-like 4 OS=Arabidopsis thaliana OX=3702 GN=At1g62600 PE=2 SV=1
Q9FWW3	Flavin-containing monooxygenase FMO GS-OX-like 6 OS=Arabidopsis thaliana OX=3702 GN=At1g12130 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00743	FMO-like	Flavin-binding monooxygenase-like	Family	Interproscan
PF07859	Abhydrolase_3	alpha/beta hydrolase fold	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029058	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR036188	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR050346	Family	Flavin-containing Monooxygenases	Interproscan
IPR020946	Family	Flavin monooxygenase-like	Interproscan
IPR013094	Domain	Alpha/beta hydrolase fold-3	Interproscan
IPR000960	Family	Flavin monooxygenase FMO	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23023	DIMETHYLANILINE MONOOXYGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004499	Molecular Function	N,N-dimethylaniline monooxygenase activity	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0050661	Molecular Function	NADP binding	Interproscan
GO:0016787	Molecular Function	hydrolase activity	Interproscan