Detailed information of HSymV2.0_g12.20815_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_12:6561310...6575007
NR annotation: XP_047136448.1, WD repeat-containing protein 75 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7ZVR1WD repeat-containing protein 75 OS=Danio rerio OX=7955 GN=wdr75 PE=2 SV=2
O13878U3 small nucleolar RNA-associated protein 17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=utp17 PE=3 SV=3
Q02931NET1-associated nuclear protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=NAN1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44215WD REPEAT-CONTAINING PROTEIN 75Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0045943Biological Processpositive regulation of transcription by RNA polymerase IInterproscan
GO:2000234Biological Processpositive regulation of rRNA processingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14552NAN1, UTP17, WDR75; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)-Ribosome biogenesisko03009deepkoala

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