Gene detail

Detailed information of HSymV2.0_g12.20839_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_12:6833080...6836961
NR annotation: XP_002163037.3, probable transcriptional regulatory protein Nther_1800 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q0AX12	Probable transcriptional regulatory protein Swol_1435 OS=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) OX=335541 GN=Swol_1435 PE=3 SV=1
Q1MRQ1	Probable transcriptional regulatory protein LI0269 OS=Lawsonia intracellularis (strain PHE/MN1-00) OX=363253 GN=LI0269 PE=3 SV=1
B6JJ00	Probable transcriptional regulatory protein OCAR_7305/OCA5_c08120 OS=Afipia carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5) OX=504832 GN=OCAR_7305 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01709	Transcrip_reg	TACO1/YebC second and third domain	Family	Interproscan
PF20772	TACO1_YebC_N	TACO1/YebC protein N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002876	Family	Transcriptional regulator TACO1-like	Interproscan
IPR017856	Homologous_superfamily	Integrase-like, N-terminal	Interproscan
IPR026564	Homologous_superfamily	Transcriptional regulator TACO1-like, domain 3	Interproscan
IPR029072	Homologous_superfamily	YebC-like	Interproscan
IPR048300	Domain	TACO1/YebC-like, second and third domains	Interproscan
IPR049083	Domain	TACO1/YebC-like, N-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12532	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005739	Cellular Component	mitochondrion	Interproscan