Gene detail

Detailed information of HSymV2.0_g12.21106_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_12:9914785...9916261
NR annotation: XP_022779326.1, E3 ubiquitin-protein ligase MARCH11-like isoform X2 [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q0P496	E3 ubiquitin-protein ligase MARCHF4 OS=Danio rerio OX=7955 GN=marchf4 PE=2 SV=1
Q6ZQ89	E3 ubiquitin-protein ligase MARCHF6 OS=Mus musculus OX=10090 GN=Marchf6 PE=2 SV=2
O60337	E3 ubiquitin-protein ligase MARCHF6 OS=Homo sapiens OX=9606 GN=MARCHF6 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12906	RINGv	RING-variant domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011016	Domain	Zinc finger, RING-CH-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR046356	Family	E3 ubiquitin-protein ligase MARCHF4/9/11	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46053	E3 UBIQUITIN-PROTEIN LIGASE MARCH4-LIKE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan