Gene detail

Detailed information of HSymV2.0_g12.21204_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_12:10952700...10953751
NR annotation: XP_002158824.2, probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q99KN2	Probable cytosolic iron-sulfur protein assembly protein CIAO1 OS=Mus musculus OX=10090 GN=Ciao1 PE=1 SV=1
Q5M7T1	Probable cytosolic iron-sulfur protein assembly protein CIAO1 OS=Rattus norvegicus OX=10116 GN=Ciao1 PE=2 SV=1
O76071	Probable cytosolic iron-sulfur protein assembly protein CIAO1 OS=Homo sapiens OX=9606 GN=CIAO1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680	Repeat	WD40 repeat	Interproscan
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR020472	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR028608	Family	Probable cytosolic iron-sulfur protein assembly protein, CIAO1/Cia1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19920	WD40 PROTEIN CIAO1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016226	Biological Process	iron-sulfur cluster assembly	Interproscan
GO:0097361	Cellular Component	cytosolic [4Fe-4S] assembly targeting complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24730	CIAO1, CIA1; cytosolic iron-sulfur protein assembly protein CIAO1	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala