Detailed information of HSymV2.0_g12.21220_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_12:11134031...11142992
NR annotation: XP_020906744.1, PR domain zinc finger protein 12 isoform X2 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A2AJ77PR domain zinc finger protein 12 OS=Mus musculus OX=10090 GN=Prdm12 PE=2 SV=1
Q9H4Q4PR domain zinc finger protein 12 OS=Homo sapiens OX=9606 GN=PRDM12 PE=1 SV=2
Q3UZD5Putative histone-lysine N-methyltransferase PRDM6 OS=Mus musculus OX=10090 GN=Prdm6 PE=1 SV=1
Gene familySubfamily
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF00240ubiquitinUbiquitin familyDomainInterproscan
PF21549PRDM2_PRPR domain zinc finger protein 2, PR domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050331FamilyZinc fingerInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR000626DomainUbiquitin-like domainInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR001214DomainSET domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16515PR DOMAIN ZINC FINGER PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0045165Biological Processcell fate commitmentInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24255PRDM12; PR domain zinc finger protein 12EC:2.1.1.-
Chromosome and associated proteinsko03036deepkoala

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