Detailed information of HSymV2.0_g12.21655_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_12:18331895...18347395
NR annotation: XP_047136523.1, integrin alpha-8 isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P26009Integrin alpha-8 OS=Gallus gallus OX=9031 GN=ITGA8 PE=1 SV=1
P11688Integrin alpha-5 OS=Mus musculus OX=10090 GN=Itga5 PE=1 SV=3
Q06274Integrin alpha-5 OS=Xenopus laevis OX=8355 GN=itga5 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20805Integrin_A_Ig_2Integrin alpha Ig-like domain 2DomainInterproscan
PF01839FG-GAPFG-GAP repeatRepeatInterproscan
PF20806Integrin_A_Ig_3Integrin alpha Ig-like domain 3DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032695Homologous_superfamilyIntegrin domain superfamilyInterproscan
IPR018184Conserved_siteIntegrin alpha chain, C-terminal cytoplasmic region, conserved siteInterproscan
IPR013519RepeatIntegrin alpha beta-propellorInterproscan
IPR048285DomainIntegrin alpha, second immunoglobulin-like domainInterproscan
IPR013517RepeatFG-GAP repeatInterproscan
IPR048286DomainIntegrin alpha, third immunoglobulin-like domainInterproscan
IPR028994Homologous_superfamilyIntegrin alpha, N-terminalInterproscan
IPR000413FamilyIntegrin alpha chainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23220INTEGRIN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0007229Biological Processintegrin-mediated signaling pathwayInterproscan
GO:0008305Cellular Componentintegrin complexInterproscan
GO:0009897Cellular Componentexternal side of plasma membraneInterproscan
GO:0033627Biological Processcell adhesion mediated by integrinInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0007155Biological Processcell adhesionInterproscan

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