Genomic Location: HiC_scaffold_12:19726234...19737051
NR annotation: ABG80451.1, fibrillar collagen, partial [Hydra vulgaris]
| CDS |
| HSymV2.0_g12.21765_t1 |
| Transcript |
| HSymV2.0_g12.21765_t1 |
| Protein |
| HSymV2.0_g12.21765_t1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01391 | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| PF01410 | COLFI | Fibrillar collagen C-terminal domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR008160 | Repeat | Collagen triple helix repeat | Interproscan |
| IPR000885 | Domain | Fibrillar collagen, C-terminal | Interproscan |
| IPR050149 | Family | Collagen superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24023 | COLLAGEN ALPHA | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005201 | Molecular Function | extracellular matrix structural constituent | Interproscan |
| GO:0005615 | Cellular Component | extracellular space | Interproscan |
| GO:0031012 | Cellular Component | extracellular matrix | Interproscan |
