Gene detail

Detailed information of HSymV2.0_g12.21784_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_12:20007309...20037831
NR annotation: WP_180569087.1, MULTISPECIES: class I SAM-dependent methyltransferase [Oceanospirillales]

Gene Structure

More details in Jbrowse

Sequence

CDS

HSymV2.0_g12.21784_t1

ATGATGTCGACGGACAACGCAACGGATTATTTAAAATACAACCATCTCGCACAGGAAGAGGTATTTGCGAGTTTAGTGTCCAAGTTAGGTATAAAACCTGGATTTAGGTGCCTTGATATTGGTTGTGGACCTGGTGATTTCACGAAACGTTTGGTTGATTTTGTGGGAAAAGATGGATATGTCCTTGGTGTTGATCCTGACGAAAACAGGATAAATGTTGCTAAAGAGGCTTACTCACTTGTTCCTAACTTAGACTTTATGTGTATAAACGCTGGAAACATGCCCACCGATCTTCAGAAATTTGATGTTGCTTCCTCAAGTTTTGTTTTGCATTGGATGAAAAACGAGGAAAAGTGGAAGACACTAGAAAATGTTTTCAACCTACTAAAGACAGGGGGAACATTTAGTTTCCGATGTTTGTTAAATCAACCTGAGTTGAACAAACGTATATATAGCTTTGTGGAAGATAAAGAAAAAATTGCCCATGTCCTAAACATGGAATTCCCGACGTTAAACGAATATAAACAAAAATTAACAGAAAATATCGAACTTTCGCTTTCGTATGTTGTAAAGTATTTAAACGCAGGAATGAATGAACCTTTCACAGAACTGCAGGGTTTTGACGTTAGATTTGTAACAGGTGGTTGGATTCAGATGCTAGCTGACACTTCCTTTATCACCTTTATGAAATGGCGAAGCCAAAACCACAATACTCTAAACAATGAAAGGACAGGATTACCAAGACGTGCGTTTGTTAACTATAAAGACCTAAATGCCGCTCAAACAGCACAGAAAGCTATGGATAACAAAAAGTTTTGTGGGCTCAACGTAAGAACCAGCCTGAAAATTAATGATTCATCAATATCACAATCCAATAAAATAAACTTCCAGCCATTGACAGACTGTTCATTTTTTGAAAAGGGGGAATGTAATCCAAAAAATGGAAAGGTATGTCCTTACAGACATAACTTACTAACAGATCAACCAGAGTGTAGCTTGTGGCAAAGCGGAAAGTGTCAAAATGTCAAATGTATATATCGTCATCCCAAGAAAGTATCTGCACCACCAACAGAAACTCCCGTTCCAACATCAAGGTCTAGTATCAATCCTTACTCTGCTCGACCAAGAACCTCTGGTCATAAACCTTCGATTAGGCTTAATGTGGGAATGGATGTTGCTGTTGAGCATGATGGAAAAGATTTGAATGGTATTGTAAGATGGATAGGCAAAATTCATTCGATATTAAAAGAAGACACTTTTGTTGGTGTTGAATTGGCGTCTCCAGTTTCCACTGGAACTGATGGTACATTTCACTCACAACGGTTTTTTTCATGCCAACCTGGCCATGCAATATTTGTGAAAGATTCTTTGTGTAAAGCGCCGTTATTGTTACCAATCAAAGTTCCAGCAAGGGATGGCATTTCAGTTAAAGAAATGAATGTGTGTGGTCACTATTTGCAGAATATTTGTAGGGCAGGGGATAAATGTGACTTAATGCACCCTCCAGTACCATCGTCGTTTATCTGGTGTTTTAAACAACTGGGTGATGTGGAATACACTTGTTGCTCTGTAAACTTAAATTCGGAAATTGAAAAAGCGTATTGCAATCCTAACTCCAGTAAATATAAGAAAGCAGGTTCATTGGAAGTCAATTTTGAATTATTGGGTCAATGTATTTACAAAAGTCTTCCTGTGAGCTTTAAACGATTTTCAACAAAGTCCATTTCCGTATTTCCCGATGAACCAATGGCAACAACATGGAAATGGTACTGGTTGGATGATAATCAATTATGGCAAGAGTACCTAAATGAGGGATCGACAAGAAATGATCTCATAGAAAGAGCTTATCATGATTGGTTGCACAATGGGTCAACCGACATCTttaaatttaatacacttcaatttcactatcaactggaattcaatacaatgcaTCAGGTGAATTTAGATCCAAAGTATGGTACTAAACGTGCGGTGAGAAGAAGACCAGTTTTAGCTGCTCCCACATCAAGGTTGTCGCCTGATTCTTCGTCGCCATCTACTGGGCGTTACCCTGAACATTGGCCGTCCACGTTCCCTTCATGTGGCTACCTTTTGTTGAAAGTTGATCGAAACACGACAAATGATTAA

Transcript

HSymV2.0_g12.21784_t1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01302	CAP_GLY	CAP-Gly domain	Domain	Interproscan
PF02825	WWE	WWE domain	Family	Interproscan
PF13649	Methyltransf_25	Methyltransferase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000571	Domain	Zinc finger, CCCH-type	Interproscan
IPR000938	Domain	CAP Gly-rich domain	Interproscan
IPR051712	Family	Mono-ADP-ribosyltransferase and antiviral protein	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR036859	Homologous_superfamily	CAP Gly-rich domain superfamily	Interproscan
IPR004170	Domain	WWE domain	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR037197	Homologous_superfamily	WWE domain superfamily	Interproscan
IPR041698	Domain	Methyltransferase domain 25	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45740	POLY [ADP-RIBOSE] POLYMERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0003950	Molecular Function	NAD+-protein poly-ADP-ribosyltransferase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0140289	Biological Process	obsolete protein mono-ADP-ribosylation	Interproscan
GO:1990404	Molecular Function	NAD+-protein ADP-ribosyltransferase activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan