Detailed information of HSymV2.0_g12.21889_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_12:21163525...21167234
NR annotation: XP_047137271.1, vacuolar protein sorting-associated protein 41 homolog [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
E7F590Vacuolar protein sorting-associated protein 41 homolog OS=Danio rerio OX=7955 GN=vps41 PE=1 SV=1
Q5KU39Vacuolar protein sorting-associated protein 41 homolog OS=Mus musculus OX=10090 GN=Vps41 PE=1 SV=1
P49754Vacuolar protein sorting-associated protein 41 homolog OS=Homo sapiens OX=9606 GN=VPS41 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
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 InterPro
InterPro termTypeDescriptionSource
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR045111FamilyVacuolar protein sorting-associated protein Vps41/Vps8Interproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12616VACUOLAR PROTEIN SORTING VPS41Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005770Cellular Componentlate endosomeInterproscan
GO:0006623Biological Processprotein targeting to vacuoleInterproscan
GO:0009267Biological Processcellular response to starvationInterproscan
GO:0016236Biological ProcessmacroautophagyInterproscan
GO:0030897Cellular ComponentHOPS complexInterproscan
GO:0034058Biological Processendosomal vesicle fusionInterproscan

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