Detailed information of HSymV2.0_g12.22095_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_12:23375416...23397719
NR annotation: XP_047136896.1, uncharacterized protein LOC100201272 isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q0E9H9Cell adhesion molecule Dscam1 OS=Drosophila melanogaster OX=7227 GN=Dscam1 PE=1 SV=1
A1KZ92Probable oxidoreductase PXDNL OS=Homo sapiens OX=9606 GN=PXDNL PE=1 SV=3
Q62845Contactin-4 OS=Rattus norvegicus OX=10116 GN=Cntn4 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF08685GONGON domainDomainInterproscan
PF000027tm_27 transmembrane receptor (Secretin family)FamilyInterproscan
PF16489GAINGPCR-Autoproteolysis INducing (GAIN) domainDomainInterproscan
PF01825GPSGPCR proteolysis site, GPS, motif MotifInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001611RepeatLeucine-rich repeatInterproscan
IPR000203Conserved_siteGPS motifInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR012314DomainPeptidase M12B, GON-ADAMTSsInterproscan
IPR000832FamilyGPCR, family 2, secretin-likeInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR046338Homologous_superfamilyGAIN domain superfamilyInterproscan
IPR032471DomainGAIN domain, N-terminalInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR017981DomainGPCR, family 2-like, 7TMInterproscan
IPR050958FamilyCell Adhesion and Cytoskeletal OrganizationInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45080CONTACTIN 5Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0007166Biological Processcell surface receptor signaling pathwayInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0008046Molecular Functionaxon guidance receptor activityInterproscan
GO:0030424Cellular ComponentaxonInterproscan
GO:0043025Cellular Componentneuronal cell bodyInterproscan
GO:0050808Biological Processsynapse organizationInterproscan

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