Genomic Location: HiC_scaffold_12:24411324...24431013
NR annotation: XP_055480932.1, semaphorin-5B [Psammomys obesus]
| CDS |
| HSymV2.0_g12.22201_t1 |
| Transcript |
| HSymV2.0_g12.22201_t1 |
| Protein |
| HSymV2.0_g12.22201_t1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01403 | Sema | Sema domain | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR036383 | Homologous_superfamily | Thrombospondin type-1 (TSP1) repeat superfamily | Interproscan |
| IPR000884 | Repeat | Thrombospondin type-1 (TSP1) repeat | Interproscan |
| IPR001627 | Domain | Sema domain | Interproscan |
| IPR027231 | Family | Semaphorin | Interproscan |
| IPR016201 | Domain | PSI domain | Interproscan |
| IPR036352 | Homologous_superfamily | Sema domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11036 | SEMAPHORIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0001755 | Biological Process | neural crest cell migration | Interproscan |
| GO:0030215 | Molecular Function | semaphorin receptor binding | Interproscan |
| GO:0030335 | Biological Process | positive regulation of cell migration | Interproscan |
| GO:0045499 | Molecular Function | chemorepellent activity | Interproscan |
| GO:0048843 | Biological Process | negative regulation of axon extension involved in axon guidance | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K06841 | SEMA5; semaphorin 5 | - | Axon guidance | ko04360 | deepkoala |
