Detailed information of HSymV2.0_g13.22563_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_13:9589865...9605817
NR annotation: XP_052097108.1, tubulin epsilon chain-like [Mytilus californianus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9UJT0Tubulin epsilon chain OS=Homo sapiens OX=9606 GN=TUBE1 PE=1 SV=1
Q9D6T1Tubulin epsilon chain OS=Mus musculus OX=10090 GN=Tube1 PE=1 SV=1
Q3SZP8Transcriptional adapter 2-alpha OS=Bos taurus OX=9913 GN=TADA2A PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyMYB

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00249Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan
PF03953Tubulin_CTubulin C-terminal domainDomainInterproscan
PF00153Mito_carrMitochondrial carrier proteinRepeatInterproscan
PF04433SWIRMSWIRM domainDomainInterproscan
PF00091TubulinTubulin/FtsZ family, GTPase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001005DomainSANT/Myb domainInterproscan
IPR017975Conserved_siteTubulin, conserved siteInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR018316DomainTubulin/FtsZ, 2-layer sandwich domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR000217FamilyTubulinInterproscan
IPR004057FamilyEpsilon tubulinInterproscan
IPR018108RepeatMitochondrial substrate/solute carrierInterproscan
IPR007526DomainSWIRM domainInterproscan
IPR017884DomainSANT domainInterproscan
IPR008280Homologous_superfamilyTubulin/FtsZ, C-terminalInterproscan
IPR023395Homologous_superfamilyMitochondrial carrier domain superfamilyInterproscan
IPR003008DomainTubulin/FtsZ, GTPase domainInterproscan
IPR023123Homologous_superfamilyTubulin, C-terminalInterproscan
IPR017930DomainMyb domainInterproscan
IPR036525Homologous_superfamilyTubulin/FtsZ, GTPase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11588TUBULINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005874Cellular ComponentmicrotubuleInterproscan
GO:0007017Biological Processmicrotubule-based processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000226Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0000278Biological Processmitotic cell cycleInterproscan
GO:0005200Molecular Functionstructural constituent of cytoskeletonInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

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