Detailed information of HSymV2.0_g13.22657_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_13:10533357...10554402
NR annotation: XP_047141821.1, CAP-Gly domain-containing linker protein 1-like isoform X3 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9UDT6CAP-Gly domain-containing linker protein 2 OS=Homo sapiens OX=9606 GN=CLIP2 PE=1 SV=1
Q9Z0H8CAP-Gly domain-containing linker protein 2 OS=Mus musculus OX=10090 GN=Clip2 PE=1 SV=2
Q922J3CAP-Gly domain-containing linker protein 1 OS=Mus musculus OX=10090 GN=Clip1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16641CLIP1_ZNFCLIP1 zinc knuckleFamilyInterproscan
PF01302CAP_GLYCAP-Gly domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036859Homologous_superfamilyCAP Gly-rich domain superfamilyInterproscan
IPR000938DomainCAP Gly-rich domainInterproscan
IPR032108DomainCLIP1, zinc knuckleInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18916DYNACTIN 1-RELATED MICROTUBULE-BINDINGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005938Cellular Componentcell cortexInterproscan
GO:0031122Biological Processcytoplasmic microtubule organizationInterproscan
GO:0035371Cellular Componentmicrotubule plus-endInterproscan
GO:0051010Molecular Functionmicrotubule plus-end bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10421CLIP1, RSN; CAP-Gly domain-containing linker protein 1-Cytoskeleton proteinsko04812deepkoala

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