Detailed information of HSymV2.0_g13.22838_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_13:13013295...13027916
NR annotation: XP_047142677.1, uncharacterized protein LOC100210520 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B3EWZ5MAM and LDL-receptor class A domain-containing protein 1 (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
B3EWZ6MAM and LDL-receptor class A domain-containing protein 2 (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
Q8HY10C-type lectin domain family 4 member M OS=Nomascus concolor OX=29089 GN=CLEC4M PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF07648Kazal_2Kazal-type serine protease inhibitor domainDomainInterproscan
PF06119NIDONidogen-likeFamilyInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR051560FamilyMAM domain-containing proteinInterproscan
IPR003886DomainNIDO domainInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR002350DomainKazal domainInterproscan
IPR000998DomainMAM domainInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR036058Homologous_superfamilyKazal domain superfamilyInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23282APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

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