Detailed information of HSymV2.0_g13.22882_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_13:13575176...13597787
NR annotation: XP_047141670.1, paxillin isoform X1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P49023Paxillin OS=Homo sapiens OX=9606 GN=PXN PE=1 SV=3
Q8VI36Paxillin OS=Mus musculus OX=10090 GN=Pxn PE=1 SV=1
Q5R7I1Paxillin OS=Pongo abelii OX=9601 GN=PXN PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03535PaxillinPaxillin familyFamilyInterproscan
PF04063DUF383Domain of unknown function (DUF383)FamilyInterproscan
PF00412LIMLIM domainDomainInterproscan
PF04064DUF384Domain of unknown function (DUF384)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001781DomainZinc finger, LIM-typeInterproscan
IPR007205DomainProtein HGH1 N-terminalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR007206DomainProtein HGH1 C-terminalInterproscan
IPR047075DomainPaxillin/TGFB1I1, LIM domain 1Interproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24210LIM DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005911Cellular Componentcell-cell junctionInterproscan
GO:0005925Cellular Componentfocal adhesionInterproscan
GO:0045216Biological Processcell-cell junction organizationInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:1900026Biological Processpositive regulation of substrate adhesion-dependent cell spreadingInterproscan
GO:2001046Biological Processpositive regulation of integrin-mediated signaling pathwayInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08705NR5A3, ftz-f1; nuclear receptor subfamily 5 group A member 3-Nuclear receptorsko03310deepkoala

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