Gene detail

Detailed information of HSymV2.0_g13.22918_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_13:14047172...14051441
NR annotation: XP_006127370.1, rhombotin-2 isoform X1 [Pelodiscus sinensis]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q1LZ94	Rhombotin-2 OS=Bos taurus OX=9913 GN=LMO2 PE=2 SV=1
P25791	Rhombotin-2 OS=Homo sapiens OX=9606 GN=LMO2 PE=1 SV=1
P25801	Rhombotin-2 OS=Mus musculus OX=10090 GN=Lmo2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00412	LIM	LIM domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001781	Domain	Zinc finger, LIM-type	Interproscan
IPR050945	Family	LMO/RBTN Transcription Factors	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45787	LD11652P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003713	Molecular Function	transcription coactivator activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0140297	Molecular Function	DNA-binding transcription factor binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24098	LMO1_3; rhombotin-1/3	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala