Genomic Location: HiC_scaffold_13:16568796...16613311
NR annotation: XP_047142296.1, squamous cell carcinoma antigen recognized by T-cells 3 isoform X1 [Hydra vulgaris]
| CDS | ||||
| HSymV2.0_g13.23084_t1 | ||||
| Transcript |
| HSymV2.0_g13.23084_t1 |
| Protein |
| HSymV2.0_g13.23084_t1 |
| Uniprot term | Description |
|---|---|
| B3DJT0 | Spliceosome associated factor 3, U4/U6 recycling protein OS=Danio rerio OX=7955 GN=sart3 PE=2 SV=1 |
| Q9JLI8 | Spliceosome associated factor 3, U4/U6 recycling protein OS=Mus musculus OX=10090 GN=Sart3 PE=1 SV=1 |
| Q15020 | Spliceosome associated factor 3, U4/U6 recycling protein OS=Homo sapiens OX=9606 GN=SART3 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF15299 | ALS2CR8 | Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8 | Family | Interproscan |
| PF16605 | LSM_int_assoc | LSM-interacting associated unstructured | Disordered | Interproscan |
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| PF05843 | Suf | Suppressor of forked protein (Suf) | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR029309 | Family | Calcium-responsive transcription factor | Interproscan |
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR003107 | Repeat | HAT (Half-A-TPR) repeat | Interproscan |
| IPR008847 | Domain | Suppressor of forked | Interproscan |
| IPR034217 | Domain | SART3, RNA recognition motif 1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR17204 | PRE-MRNA PROCESSING PROTEIN PRP39-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003700 | Molecular Function | DNA-binding transcription factor activity | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0006396 | Biological Process | RNA processing | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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