Detailed information of HSymV2.0_g13.23289_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_13:20953281...20968521
NR annotation: XP_012556655.1, titin homolog isoform X5 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2KN93Cytospin-A OS=Danio rerio OX=7955 GN=specc1la PE=2 SV=2
Q2KN96Cytospin-A OS=Xenopus tropicalis OX=8364 GN=specc1l PE=2 SV=1
Q2KNA0Cytospin-A OS=Canis lupus familiaris OX=9615 GN=SPECC1L PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12510SmoothelinSmoothelin cytoskeleton proteinFamilyInterproscan
PF00307CHCalponin homology (CH) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR022189DomainSmoothelinInterproscan
IPR001715DomainCalponin homology domainInterproscan
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR050540FamilyF-actin Monooxygenase MicalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23167CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005815Cellular Componentmicrotubule organizing centerInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0031941Cellular Componentfilamentous actinInterproscan

TOP