Gene detail

Detailed information of HSymV2.0_g13.23387_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_13:21844478...21846959
NR annotation: KAH9088010.1, hypothetical protein Ae201684P_015539 [Aphanomyces euteiches]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P04146	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14223	Retrotran_gag_2	gag-polypeptide of LTR copia-type	Family	Interproscan
PF00098	zf-CCHC	Zinc knuckle	Domain	Interproscan
PF07727	RVT_2	Reverse transcriptase (RNA-dependent DNA polymerase)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR013103	Domain	Reverse transcriptase, RNA-dependent DNA polymerase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42648	TRANSPOSASE, PUTATIVE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan