Gene detail

Detailed information of HSymV2.0_g13.23446_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_13:22358961...22370625
NR annotation: CAB4043790.1, lipoxygenase homology domain-containing 1-like, partial [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q8IVV2	Lipoxygenase homology domain-containing protein 1 OS=Homo sapiens OX=9606 GN=LOXHD1 PE=2 SV=4
C8YR32	Lipoxygenase homology domain-containing protein 1 OS=Mus musculus OX=10090 GN=Loxhd1 PE=2 SV=1
Q9Z0T6	Polycystin family receptor for egg jelly OS=Mus musculus OX=10090 GN=Pkdrej PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01477	PLAT	PLAT/LH2 domain	Domain	Interproscan
PF02817	E3_binding	e3 binding domain	Family	Interproscan
PF00198	2-oxoacid_dh	2-oxoacid dehydrogenases acyltransferase (catalytic domain)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001024	Domain	PLAT/LH2 domain	Interproscan
IPR036625	Homologous_superfamily	E3-binding domain superfamily	Interproscan
IPR036392	Homologous_superfamily	PLAT/LH2 domain superfamily	Interproscan
IPR052970	Family	Inner ear hair cell lipoxygenase homology domain-containing protein	Interproscan
IPR004167	Domain	Peripheral subunit-binding domain	Interproscan
IPR001078	Domain	2-oxoacid dehydrogenase acyltransferase, catalytic domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45901	PROTEIN CBG12474	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016746	Molecular Function	acyltransferase activity	Interproscan