Genomic Location: HiC_scaffold_14:16074111...16089312
NR annotation: XP_047123929.1, 28S rRNA (cytosine-C(5))-methyltransferase [Hydra vulgaris]
| CDS | |||||
| HSymV2.0_g14.24674_t1 | |||||
| Transcript |
| HSymV2.0_g14.24674_t1 |
| Protein |
| HSymV2.0_g14.24674_t1 |
| Uniprot term | Description |
|---|---|
| Q8K4F6 | 28S rRNA (cytosine-C(5))-methyltransferase OS=Mus musculus OX=10090 GN=Nsun5 PE=1 SV=2 |
| Q96P11 | 28S rRNA (cytosine-C(5))-methyltransferase OS=Homo sapiens OX=9606 GN=NSUN5 PE=1 SV=2 |
| Q9NAA7 | 26S rRNA (cytosine-C(5))-methyltransferase nsun-5 OS=Caenorhabditis elegans OX=6239 GN=nsun-5 PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF21153 | NSUN5_N | NOL1/NOP2/Sun domain family member 5, N-terminal domain | Domain | Interproscan |
| PF21148 | NSUN5_fdxn-like | NOL1/NOP2/Sun domain family member 5, ferredoxin-like domain | Domain | Interproscan |
| PF01189 | Methyltr_RsmB-F | 16S rRNA methyltransferase RsmB/F | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR023267 | Family | RNA (C5-cytosine) methyltransferase | Interproscan |
| IPR029063 | Homologous_superfamily | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Interproscan |
| IPR048889 | Domain | NSUN5/RCM1, N-terminal domain | Interproscan |
| IPR049561 | Domain | NOL1/NOP2/NSUN 5/7, ferredoxin-like domain | Interproscan |
| IPR001678 | Domain | SAM-dependent methyltransferase RsmB-F/NOP2-type domain | Interproscan |
| IPR049560 | Domain | SAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic core | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22807 | NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0001510 | Biological Process | RNA methylation | Interproscan |
| GO:0008173 | Molecular Function | RNA methyltransferase activity | Interproscan |
| GO:0005730 | Cellular Component | nucleolus | Interproscan |
| GO:0070475 | Biological Process | rRNA base methylation | Interproscan |
| GO:0008168 | Molecular Function | methyltransferase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K15264 | NSUN5, WBSCR20, RCM1; 25S rRNA (cytosine2278-C5)-methyltransferase | EC:2.1.1.311 | Ribosome biogenesis | ko03009 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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