Gene detail

Detailed information of HSymV2.0_g15.25050_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_15:1890580...1893211
NR annotation: XP_012559939.2, uncharacterized protein LOC101235045 isoform X1 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	zf-CCCH

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00642	zf-CCCH	Zinc finger C-x8-C-x5-C-x3-H type (and similar)	Family	Interproscan
PF14608	zf-CCCH_2	RNA-binding, Nab2-type zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000571	Domain	Zinc finger, CCCH-type	Interproscan
IPR045124	Family	Protein suppressor of sable-like	Interproscan
IPR036855	Homologous_superfamily	Zinc finger, CCCH-type superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13119	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0045892	Biological Process	negative regulation of DNA-templated transcription	Interproscan