Gene detail

Detailed information of HSymV2.0_g15.25083_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_15:2260810...2264934
NR annotation: XP_012562208.1, thyrotroph embryonic factor-like isoform X2 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
P97516	Thyrotroph embryonic factor (Fragment) OS=Phodopus sungorus OX=10044 GN=TEF PE=2 SV=1
Q9JLC6	Thyrotroph embryonic factor OS=Mus musculus OX=10090 GN=Tef PE=2 SV=1
P41224	Thyrotroph embryonic factor OS=Rattus norvegicus OX=10116 GN=Tef PE=1 SV=3

Gene family	Subfamily
Transcription Factors Family	TF_bZIP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07716	bZIP_2	Basic region leucine zipper	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004827	Domain	Basic-leucine zipper domain	Interproscan
IPR046347	Homologous_superfamily	Basic-leucine zipper domain superfamily	Interproscan
IPR047229	Family	Nuclear factor interleukin-3-regulated protein-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15284	NUCLEAR FACTOR INTERLEUKIN-3-REGULATED PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0007623	Biological Process	circadian rhythm	Interproscan