Detailed information of HSymV2.0_g15.25085_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_15:2271299...2287604
NR annotation: XP_047125332.1, nephrocystin-3 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P0CI65Nephrocystin-3 OS=Danio rerio OX=7955 GN=nphp3 PE=3 SV=1
Q6AZT7Nephrocystin-3 OS=Xenopus laevis OX=8355 GN=nphp3 PE=2 SV=1
Q7Z494Nephrocystin-3 OS=Homo sapiens OX=9606 GN=NPHP3 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13424TPR_12Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR051191FamilyDDB1-CUL4-associated factor 12Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19860DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0080008Cellular ComponentCul4-RING E3 ubiquitin ligase complexInterproscan

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