Gene detail

Detailed information of HSymV2.0_g15.25089_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_15:2328282...2329152
NR annotation: APW77290.1, Sox25 [Hydractinia echinata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q32PP9	Transcription factor Sox-14 OS=Danio rerio OX=7955 GN=sox14 PE=2 SV=1
Q20201	Transcription factor sox-3 OS=Caenorhabditis elegans OX=6239 GN=sox-3 PE=2 SV=1
A4QNG3	Transcription factor Sox-14 OS=Xenopus tropicalis OX=8364 GN=sox14 PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	HMG

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00505	HMG_box	HMG (high mobility group) box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036910	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR050140	Family	SRY-related HMG-box transcription factors	Interproscan
IPR009071	Domain	High mobility group box domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10270	SOX TRANSCRIPTION FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22496	RFG1, ROX1; repressor RFG1/ROX1	-	Transcription factors	ko03000	deepkoala