Detailed information of HSymV2.0_g15.25169_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_15:3444382...3494704
NR annotation: XP_047130497.1, hemicentin-1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8WZ42Titin OS=Homo sapiens OX=9606 GN=TTN PE=1 SV=4
Q8NDA2Hemicentin-2 OS=Homo sapiens OX=9606 GN=HMCN2 PE=1 SV=4
A2AJ76Hemicentin-2 OS=Mus musculus OX=10090 GN=Hmcn2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13895Ig_2Immunoglobulin domainDomainInterproscan
PF06119NIDONidogen-likeFamilyInterproscan
PF12947EGF_3EGF domainDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR013106DomainImmunoglobulin V-set domainInterproscan
IPR003886DomainNIDO domainInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR000742DomainEGF-like domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR003006Conserved_siteImmunoglobulin/major histocompatibility complex, conserved siteInterproscan
IPR024731DomainEGF domainInterproscan
IPR050831FamilyCarcinoembryonic antigen-related cell adhesionInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44427CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 19Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

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