Gene detail

Detailed information of HSymV2.0_g17.25687_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_17:32040...33380
NR annotation: MBN2535154.1, UDP-glucose/GDP-mannose dehydrogenase family protein [Spirochaetales bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q1RKF8	UDP-glucose 6-dehydrogenase OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=udg PE=3 SV=1
O54068	UDP-glucose 6-dehydrogenase OS=Rhizobium meliloti (strain 1021) OX=266834 GN=rkpK PE=1 SV=2
Q4UK39	UDP-glucose 6-dehydrogenase OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) OX=315456 GN=udg PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03720	UDPG_MGDP_dh_C	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain	Domain	Interproscan
PF03721	UDPG_MGDP_dh_N	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain	Domain	Interproscan
PF00984	UDPG_MGDP_dh	UDP-glucose/GDP-mannose dehydrogenase family, central domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014027	Domain	UDP-glucose/GDP-mannose dehydrogenase, C-terminal	Interproscan
IPR017476	Family	UDP-glucose/GDP-mannose dehydrogenase	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR028357	Family	UDP-glucose 6-dehydrogenase, bacterial type	Interproscan
IPR036220	Homologous_superfamily	UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily	Interproscan
IPR001732	Domain	UDP-glucose/GDP-mannose dehydrogenase, N-terminal	Interproscan
IPR014026	Domain	UDP-glucose/GDP-mannose dehydrogenase, dimerisation	Interproscan
IPR008927	Homologous_superfamily	6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43750	UDP-GLUCOSE 6-DEHYDROGENASE TUAD	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016616	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan
GO:0051287	Molecular Function	NAD binding	Interproscan
GO:0000271	Biological Process	polysaccharide biosynthetic process	Interproscan
GO:0003979	Molecular Function	UDP-glucose 6-dehydrogenase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00012	UGDH, ugd; UDPglucose 6-dehydrogenase	EC:1.1.1.22	O-Antigen nucleotide sugar biosynthesis	ko00541	deepkoala