Gene detail

Detailed information of HSymV2.0_g17.25705_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_17:77732...78292
NR annotation: MBP8612401.1, ribulose-phosphate 3-epimerase [Candidatus Atribacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O66107	Ribulose-phosphate 3-epimerase OS=Treponema pallidum (strain Nichols) OX=243276 GN=rpe PE=3 SV=1
O34557	Ribulose-phosphate 3-epimerase OS=Bacillus subtilis (strain 168) OX=224308 GN=rpe PE=3 SV=1
Q9ZTP5	Ribulose-phosphate 3-epimerase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RPE PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00834	Ribul_P_3_epim	Ribulose-phosphate 3 epimerase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000056	Family	Ribulose-phosphate 3-epimerase-like	Interproscan
IPR013785	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR011060	Homologous_superfamily	Ribulose-phosphate binding barrel	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11749	RIBULOSE-5-PHOSPHATE-3-EPIMERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004750	Molecular Function	D-ribulose-phosphate 3-epimerase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0009052	Biological Process	pentose-phosphate shunt, non-oxidative branch	Interproscan
GO:0016857	Molecular Function	racemase and epimerase activity, acting on carbohydrates and derivatives	Interproscan
GO:0044262	Biological Process	obsolete cellular carbohydrate metabolic process	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01783	rpe, RPE; ribulose-phosphate 3-epimerase	EC:5.1.3.1	Carbon fixation in photosynthetic organisms	ko00710	deepkoala