Gene detail

Detailed information of HSymV2.0_g17.25726_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_17:129462...129827
NR annotation: MCF7913691.1, polyribonucleotide nucleotidyltransferase [Spirochaetaceae bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
B5RMZ9	Polyribonucleotide nucleotidyltransferase OS=Borrelia duttonii (strain Ly) OX=412419 GN=pnp PE=3 SV=1
B5RQE3	Polyribonucleotide nucleotidyltransferase OS=Borrelia recurrentis (strain A1) OX=412418 GN=pnp PE=3 SV=1
B2S1E9	Polyribonucleotide nucleotidyltransferase OS=Borrelia hermsii (strain HS1 / DAH) OX=314723 GN=pnp PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01138	RNase_PH	3' exoribonuclease family, domain 1	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020568	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR012162	Family	Polyribonucleotide nucleotidyltransferase	Interproscan
IPR027408	Homologous_superfamily	PNPase/RNase PH domain superfamily	Interproscan
IPR001247	Domain	Exoribonuclease, phosphorolytic domain 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11252	POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000175	Molecular Function	3'-5'-RNA exonuclease activity	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004654	Molecular Function	polyribonucleotide nucleotidyltransferase activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006401	Biological Process	RNA catabolic process	Interproscan
GO:0006402	Biological Process	mRNA catabolic process	Interproscan