Gene detail

Detailed information of HSymV2.0_g18.25744_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_18:15636...17600
NR annotation: WP_036825317.1, polysaccharide lyase 8 family protein [Photobacterium sanctipauli]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q54873	Hyaluronate lyase OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=SP_0314 PE=1 SV=2
Q53591	Hyaluronate lyase OS=Streptococcus agalactiae serotype III (strain NEM316) OX=211110 GN=hylB PE=1 SV=2
Q9AQS0	Xanthan lyase OS=Bacillus sp. (strain GL1) OX=84635 GN=xly PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02278	Lyase_8	Polysaccharide lyase family 8, super-sandwich domain	Family	Interproscan
PF08124	Lyase_8_N	Polysaccharide lyase family 8, N terminal alpha-helical domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038970	Family	Polysaccharide lyase 8	Interproscan
IPR003159	Domain	Polysaccharide lyase family 8, central domain	Interproscan
IPR008929	Homologous_superfamily	Chondroitin AC/alginate lyase	Interproscan
IPR012970	Domain	Polysaccharide lyase 8, N-terminal alpha-helical	Interproscan
IPR011013	Homologous_superfamily	Galactose mutarotase-like domain superfamily	Interproscan
IPR014718	Homologous_superfamily	Glycoside hydrolase-type carbohydrate-binding	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR38481	HYALURONATE LYASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016829	Molecular Function	lyase activity	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0030246	Molecular Function	carbohydrate binding	Interproscan