Gene detail

Detailed information of HSymV2.0_g21.25802_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_21:13634...14581
NR annotation: TVR70399.1, lipoyl synthase [Spirochaetaceae bacterium]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q8ERL8	Lipoyl synthase OS=Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831) OX=221109 GN=lipA PE=3 SV=1
Q9K7C9	Lipoyl synthase OS=Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=lipA PE=3 SV=1
Q5WDS6	Lipoyl synthase OS=Shouchella clausii (strain KSM-K16) OX=66692 GN=lipA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04055	Radical_SAM	Radical SAM superfamily	Domain	Interproscan
PF16881	LIAS_N	N-terminal domain of lipoyl synthase of Radical_SAM family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007197	Domain	Radical SAM	Interproscan
IPR003698	Family	Lipoyl synthase	Interproscan
IPR013785	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR031691	Domain	Lipoyl synthase, N-terminal	Interproscan
IPR006638	Domain	Elp3/MiaA/NifB-like, radical SAM core domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10949	LIPOYL SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0051536	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0009107	Biological Process	lipoate biosynthetic process	Interproscan
GO:0016992	Molecular Function	lipoate synthase activity	Interproscan
GO:0051539	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03644	lipA, LIAS, LIP1, LIP5; lipoyl synthase	EC:2.8.1.8	Lipoic acid metabolism	ko00785	deepkoala