Gene detail

Detailed information of KAF0986331.1 in Henneguya salminicola

Genomic Location: SGJC01007291.1:192...1442
NR annotation: KAF0986331.1, hypothetical protein HZS_2701, partial [Henneguya salminicola]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q96DI7	U5 small nuclear ribonucleoprotein 40 kDa protein OS=Homo sapiens OX=9606 GN=SNRNP40 PE=1 SV=1
Q6PE01	U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus OX=10090 GN=Snrnp40 PE=1 SV=1
Q2HJH6	U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus OX=9913 GN=SNRNP40 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680	Repeat	WD40 repeat	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR020472	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR052234	Family	U5 snRNP Complex Component	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44006	U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 40 KDA PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0071013	Cellular Component	catalytic step 2 spliceosome	Interproscan