Gene detail

Detailed information of KAF0987226.1 in Henneguya salminicola

Genomic Location: SGJC01004763.1:1...495
NR annotation: KAF0987226.1, hypothetical protein HZS_4046 [Henneguya salminicola]
Species Henneguya salminicola · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P49180	Large ribosomal subunit protein eL33 OS=Caenorhabditis elegans OX=6239 GN=rpl-35A PE=1 SV=3
Q90YT3	Large ribosomal subunit protein eL33 OS=Ictalurus punctatus OX=7998 GN=rpl35a PE=3 SV=1
P18077	Large ribosomal subunit protein eL33 OS=Homo sapiens OX=9606 GN=RPL35A PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007369 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01247 all species →	Ribosomal_L35Ae	Ribosomal protein L35Ae	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001780 all species →	Family	Large ribosomal subunit protein eL33	Interproscan
IPR038661 all species →	Homologous_superfamily	Large ribosomal subunit protein eL33 superfamily	Interproscan
IPR009000 all species →	Homologous_superfamily	Translation protein, beta-barrel domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10902 all species →	60S RIBOSOMAL PROTEIN L35A	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0002181 all species →	Biological Process	cytoplasmic translation	Interproscan
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0022625 all species →	Cellular Component	cytosolic large ribosomal subunit	Interproscan
GO:0042273 all species →	Biological Process	ribosomal large subunit biogenesis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02917	RP-L35Ae, RPL35A; large subunit ribosomal protein L35Ae	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.