Gene detail

Detailed information of KAF0988237.1 in Henneguya salminicola

Genomic Location: SGJC01003283.1:1204...3562
NR annotation: KAF0988237.1, hypothetical protein HZS_4425 [Henneguya salminicola]

Gene Structure

More details in Jbrowse

Sequence

CDS

KAF0988237.1

ATGGCGGTGCGTCGTGTGATTAAATCAGTAGATCAGATTTTAAAATTTCCGAGAGACTTTTTACCAAATTGGCATGAATTATTGCATAGTAAAGATATTATATTTTCAAATGATAAAGGTTATTTTGTAAATCTGCGATTTCAAAAATTTTTAGTAAATTTGCTAAATAGTAACGAAAAAAAGAAAGAAAACTCTACACTGGATGAAAAAATAAAGGACATGGGAATGTATTTAAAGGAGTCACTAAAAAATCCAAAGTCAACAAAAAAAACAGGCGAATTTAATAATTCGAAAAACAGAGACAATCAAGGAGGGTATTATGCTAATCTGGTGCTATTTTTGGGGTTATCTTTCACCACCATTTTGTATTTTCGCACGCTTTTGCGTGATTATCAAAAGAATTATTTGAAAGAAATCACTTGGAGTCAGATAAAAGAAAATATTTTAAAACAAAATAATTTATTGAGAATACAAACAAATTCAAATGATAATTCGATCATAATTTGCACAAAAAATAATAAAATATATAAATATACCCCAATTTCTAAAGAACACTTTATAAATAAACTTGAGCATGCGTGTGGACAATATGATTTAAATATCGATGATATTATTTTTATAACATCGAAAAATAGTCCTAAACGTTCTCCTTACGAATACATTTTCATGTTTCTTCTTTTTCTTTACATCGTCTATCGTTTGGGGAAACCTTTTAAATTTTCAGCAAAAGTAGATAAATCCTTACATTCTGTTTCCTCTCCATTTTCTGATATATTTTCGCTGAATTCAAAACGCTTTAATCAATTTAATCCCACTCAAAGCTCGGTTACATTTAATGATATAAAAGGTTGCGAAGAAGCCAAAGGTGAAATTATGGAATTTGTGGAGTTTCTTAAAAATCCAACTAATTTCTATAAAATGGGTGCGAAAATACCGAAGGGCGCCATTTTATATGGCCCCCCGGGAACTGGAAAAACACTACTAGCAAAAGCAGTTGCTGGGGAAGCCGGGGTACCCTTTTTCTTTGCTTCCGGTTCTGAATTTATTGAAATGTTAGTGGGGTTGGGGGCAAAGAGGATCCGAGAATTATTTTCCCAAGCAAAAAAAACCTCTCCCTGTATTATATTTATTGATGAGATTGATGCAATCGGATCTTCTCGCTCTAATTATCGAAACCATTCTGAGAATGATCAAACTCTCAATCAATTATTATGCGAATTAGATGGATTCAACACCGATACCAATGTTATTTTACTGTGTGGAACAAATCAGTTCCATAAATTAGATAATGCGCTAACCCGCTCAGGGCGGCTCGATCGAAAAATATTTTTAGCGCCTCCTGATTTAAACGGCCGCATTGAATTATTTAGGCTTTATTTAAGCAAAATTAAAATAGAGCAAGAATTTTGCCACGAGTATAGCAAGAGGTTAGCTGGATTAACACCTGGGTCGAATGGGGCTGATGTCGCTAATATCTGTAACGAAGCCGCCATAATGGCTACTAAAACAAATTCGTCTTTTGTTAACCTGCATCATTTAGAGCAAGCCATTGATAGACTAGTACTAGGTAATCGTTTATCTAAAAAATTAAATGAAAAAGAAAAAAGAATAGTGTCTATACATGAATGCGGTCATGCCGTCGTATCATGGTTTTTAAAAAATACACTTCCCTTACTCAAAATATCTATTGTACCACGGGGGAACGCATTAGGAGTGAACCAATTTCTTCCATCGGAAGATCATCTATATTCGCAAGATCAATTATTAGATATGATGGCGGCAGTTTTAGGCGGGAGGGCAGCCGAAGAATTAATAGTGGGATCAATATCAACTGGGGCATCCGATGATTTAACAAAAACTACTGGAATGGCATACAAACAAGTCGGTGTTTTTGGTATGGATAAATCGGTTGGTCTCGTAGCTTATCCATCTCTTAATCTAAAATTTTCTCAAGCCCCGCAACACATTTTAGGCCGTTCTAACTCTGAGAAAGAATACGGTCCTGATTTGGCCAATAAAATTGATATCTGTGTACAGGATATAGTATGTAGAGCGTATGAACGGGCCAAAGAAGTTATAACAACAAATAAACATTTATTAATGCAGTTATCTGATGAGTTGTTCATTAAAGAATTATTATCAAATAAAGAAATCGAACAAATTCTGGGTAAACGACCTGATGGAGCATTAACTGTATCACACGTTCTTGACATCCATGATCAACCTGAATCTAATAAACCATCTGTTGTCCATGAAACTGTTAAATAG

Transcript

Protein

Uniprot

Uniprot term	Description
Q8S2A7	ATP-dependent zinc metalloprotease FTSH 3, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=FTSH3 PE=2 SV=1
Q0DHL4	ATP-dependent zinc metalloprotease FTSH 8, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=FTSH8 PE=3 SV=1
Q8JZQ2	Mitochondrial inner membrane m-AAA protease component AFG3L2 OS=Mus musculus OX=10090 GN=Afg3l2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01434	Peptidase_M41	Peptidase family M41	Domain	Interproscan
PF17862	AAA_lid_3	AAA+ lid domain	Domain	Interproscan
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR050928	Family	ATP-dependent Zinc Metalloprotease	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR037219	Homologous_superfamily	Peptidase M41-like	Interproscan
IPR000642	Domain	Peptidase M41	Interproscan
IPR041569	Domain	AAA ATPase, AAA+ lid domain	Interproscan
IPR003960	Conserved_site	ATPase, AAA-type, conserved site	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43655	ATP-DEPENDENT PROTEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0005745	Cellular Component	m-AAA complex	Interproscan
GO:0034982	Biological Process	mitochondrial protein processing	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0004176	Molecular Function	ATP-dependent peptidase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08955	YME1; ATP-dependent metalloprotease	EC:3.4.24.-	Peptidases and inhibitors	ko01002	deepkoala