Gene detail

Detailed information of KAF0989656.1 in Henneguya salminicola

Genomic Location: SGJC01001909.1:538...4644
NR annotation: KAF0989656.1, hypothetical protein HZS_2673 [Henneguya salminicola]
Species Henneguya salminicola · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KAF0989656.1

ATGGTACGTAATGAATACTATCCTCTTGAGGAACAAGACGTGAAAAAATTGTTAAGATCTGGTACGCACTGTGGAGAGATAACAGTGAATTCAAATATGAAATCATTTATTTTTTTACATCGCACTGATAGTAATCCAATTTATCAACATTTAGATCATTATTGCATTGATTTAATGAAAACTTGGAATCATTTACAGCTGGCCGCTCGCATTTTATGTGGAATTGAAAATCCAAAAGACATTTATGCTGTTTCAGGAAGTCCAACAAGCCATCGTGCCGTCCTAAAATTTGCACTATATACCAAATGTAGTTCGTTTGCTGGCAAATTTACGCCTGGTTGTTTGACTAATCAAGCTCAAACGCATTTCAAGGAGCCCAGAATCATTGTTGTATCTGATCCATTAATCGATCATCAAGTTGTTATTGAGGCTGCGTGTATGGGTATCCCTGTAATTGCGCTCTGTAACACTAATTGCCCGTTGAATTACATCGATATTGTTATTCCCTGTAATAATAAAGGTGTTTGGTCGGTTGGTGTCATGTGGTGGATGTTAGCAAGAGAGGTTTTGCGCTTGCGTGGTGTGGTTTCGAGAAATAAACCGTGGAATATTATGGTGGACATGTTTTTTCAACGCGAACAAGCATTAGAAGCTAAAGAATCAACCGCAAATAAAAATGTAAAGGTTCAGCCGCAGGCAGAAGATCAAATTTTAGAAGACCTAAGCCGTGGGCGAAATCAGGAAGAGCAATCTAATCCACCCATAGATTGTCAGTCTGTTCCTGACATTGATCATTGGACCATGATACGACCGTTTATTGAGCTGAAAACAGCGGCTGAAAATTATGCCCTTAAATGTGAAACAGAATTAATTTTGCCTGATTGTTTGAATCAAATTGTGAACGAGTATAAGCCTTTGATGCAGAGTAGTATATTCAAGGGCGACAGAGTGTTGATTTTTAACGTAGAGCAAGATGCGACAAAACTTATTCATTTGTTGATGGATATTACTGAAACATATCCATGTCTGATAAATTCTATTACAGATATGATAGATTCTTCATCAACCCCTATTCGTTTTTCGGCCGACGTCATCATTAACATCGACTATCACAACTATTTTAGATCAGATACAAATGAATTACATCATTTCTATGATAACATTTTCAGTGAACTTGAAAACAATGGCCGTTTCATCATGATTATATGTAAAGCCAACCTTGAAATGCTGATATTAAATGGTATTCTGACTCAATACTGCAAACACGTGAATATAAAAATATTAGATATGAATTTTCAAATCGGAAATTTAACCGAGAATATCCTATCATATCTCTTGATAGCATTCAAAGGACCAAATAATTGCAAAACGTTGAGAATTTCTCAGGATAATAATGAAGGGAAAAACGATTATATGGAAGAGTGTGAACATTTCTTCAACATTCCTCATAAACTTAGAATTATAAACGATGAGTTAATTTCATTTTATTTCCGTCATAATTTTACCGACAGTTTTATTACCTTCAAGATAGTTAAAGATAACTTCATACATCTGAGTTATTACTTCATTGATACAGTCCAAGAAGATATTGAACATTATTATTTTGCTCGGGTTTCATCGGCAAATAAAAATTCTCAAACAATTTGCACAGAAGAATATCTAAGAAATTTAGCGGCGTCATCTAAGTGTCAACGACTTATGTTAGTTATCGTAAGATATCCTTCTGAGATGGAGAAAATTGCTATGGTAACTATTGCAGACAACGTTGTAACAATATTAAAAAGGTACATGCCTATTTTCAAAATTGCTTGCGTAGACGCCAGTATTTATAAACCAGAAATACCAATTTTATGGATGTTGGAAGAAAATCATACCATAGCTGTTTATTATAATTATTACAGTTATTTTTTAAATAAATTTTTATATTCACATTTTTATGAATGTAAAAATACTCATGTTAAGATAATATTTCCTCCCAGTTACGTTACATCCAGTTTAAATCAGTCATGCGCACTACAATTATCTAATGAAATTGAAAACAACTCCGATTTGATTGATTGGCGTTTTTGTACGGTTTTGATGATCTTAACCTCTCTTTATGGGAGCCAACAACGTTTCAAGTCCTTGATTTTAAGTTCATCTGTTCATCCTTTTGCTGTTAATATCGTTAATTTGTTCACCCAAGTTCGTTCTGAAACCGTATTTAAAATTGATCATCTTAAATCAACTAATATAAGCTTGGATATCATAGAAATTTATGGACATTGTTTTTATTTTCTCGATTTCGAGAATTCCGATTTTGAATTAATCAAAAACTTTGATTATTATCCAAGAGTCGAAAATAAGAGTTATGATGTATTGATTATAAATCGAAATTTTGTCAATAATGTTAATAAAGAATATAATAACAGTGTTTCCTTCTATAATAAGGATGTATTGAAAAAAGTAAAAAAATGCCTTTCACCTGGTGGAATCTTGTTTATTATCGATCAGTTTAAAGATGATTTTGAAACTTGTATGAGTGATATTAGAAATGTATTCTATCGTACGCCAACTTGTATACAATTGCAAAATTCATGTCAATGTCTTATTGTTGTAAGAAAAAATAGAAGAAAGTGCTCACTTCTTAAATTTAATGTCTCGCCATTTTTTATGCACACGAAGGAACGGTTACCGCTTAAATTTCAACCATATTTTATTGTCAATACCTTTAACAAATATATTTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B3P9J3	Small ribosomal subunit protein uS2 OS=Drosophila erecta OX=7220 GN=sta PE=3 SV=1
P38979	Small ribosomal subunit protein uS2 OS=Drosophila melanogaster OX=7227 GN=sta PE=1 SV=3
B4I9F6	Small ribosomal subunit protein uS2 OS=Drosophila sechellia OX=7238 GN=sta PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007673 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00318 all species →	Ribosomal_S2	Ribosomal protein S2	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005707 all species →	Family	Small ribosomal subunit protein uS2, eukaryotic/archaeal	Interproscan
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR018130 all species →	Conserved_site	Small ribosomal subunit protein uS2, conserved site	Interproscan
IPR001865 all species →	Family	Small ribosomal subunit protein uS2	Interproscan
IPR023591 all species →	Homologous_superfamily	Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11489 all species →	40S RIBOSOMAL PROTEIN SA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000028 all species →	Biological Process	ribosomal small subunit assembly	Interproscan
GO:0002181 all species →	Biological Process	cytoplasmic translation	Interproscan
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0015935 all species →	Cellular Component	small ribosomal subunit	Interproscan
GO:0022627 all species →	Cellular Component	cytosolic small ribosomal subunit	Interproscan
GO:0030686 all species →	Cellular Component	90S preribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAF0989656.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.