Gene detail

Detailed information of KAF0990243.1 in Henneguya salminicola

Genomic Location: SGJC01001483.1:397...3510
NR annotation: KAF0990243.1, hypothetical protein HZS_3704, partial [Henneguya salminicola]

Gene Structure

More details in Jbrowse

Sequence

CDS

KAF0990243.1

ATGTTTAAAAAATCTAAATCTACTGGCATCTATATGGTTTCTGACTCTCCGTGCGAGTTAATAACAATAAGTCTAAGCGAATTTAATAAAGGCCAAAAGGAAGAAAATGTTCCAGATGAAGACATTGATATGGTTGAAGCTTTATTCGATAATAATTTATTGATTGCTGTACAACGTCATGCTGAAAAACTCATCGATACACTTTTTGATGAGAAATATTTAGAACATGAACCTAATTTCATAGTTGATTTCTTTATAAGTTATAAAATTTACATGGATGATACTAAAGCTTTGATGAATAAGATTGAACTTTGTTTAAATACTGACGTTCTTAGACAACAAGCAGTCTCCGCTTTAATAACATGGATCACCTACTGTCCAGATGATTTTCAAGATAATTACATGCAAGATTTTGTTATTTTTATATTAAATCTTTTGCAATCGAAATCGTGCATAGCGCTAGCTGATGTAGTTTCCCAGGTATGTTATAACAAAAGTATGGCATACGAATCTCTTGATCAAGATGAAGATATTCCCATTCGATTTAAATATCGAATCGTACCTGCTTTTCATTGTTCACGTAATTTAATTCTTCATCCACACAAGTTTGACCCTCATTCGAAAGCAGCTGGTGCAAACATTCAACTTTATGATGAAGTTTTATTCCTGAATGATTATGCCATCAGTGATATAAATGTCGCCACTTTAAAAAAGATTCTCAGCGAATCCACACTTTATCTTTTTATACTTAAACGATGTGTTACGAAATATCAATATGTCAAAAACGCCTTGATTGATTTGTATGAAGCTAAATTTCGACCTCAATCTGTATTTTCGGTATCTTCCCAACTGGAAAGAAAAAAAACTCAAAAAAGCGGGAGTATTTTTGATACTATTAATCCACGCAAAATTAGTGTTTTAAGAGTTTTAACATTGCGAAAAAATCGAAAAAAACCCTTAACTCCAAATGTTATGACTGATTTCCAAACTGTCGATTCTTCTCACAGTTCTTTAGGCGATTTAATTAATCCAATATCTGAAAAAAATGTTAAATATCCAGTAATACAAGCAAATAATGATTTTTCCCACGACGAAATAAACAACCAAGAAAATAGCAATGTTTCTGATTCGTCTTCTAATGCACATTTTGTGCTTAAAATTCTTAATGCATCCAATGATCCGAAATATTCTGTCTTTTCTAGATGTGATAATTGCAAAAAAATAGCTCATGAATTATTTCTCCATAGTTTATCATACAAACGTGCAACTTCATTACTATTATCGGATAAATGGGCCACCATCTCTTCCTCTTCTTCCCCACATATTTTTTTAGCCAAAACTTCCCCAGCTGGTTTTAAAATGAGTCGTCTTAACGATGATTTCTTTGACCTTCCTACAAAATATTCACCTGGCATTCGTTTTTATACTGCGACAAGTTCTGCAGCCATTAAAATTTCCTCCGAGGTTGAAGCAGAAATGAAAAACGAAGAATTAATTTCGTTACTGACTTTGGATTGTTGCATTTTGGCAAAAATTTTAACTATTTACGATTTTTATCAATTCTCTAAAATCGTACCTAAAGAATATCTTTCCAGGGTCTTTAAGAAAAAAGTTAATGCAACTTGTTACAACCTTGAATATTTTGAGGAAAGATGTAATTTTGAGGTTATGTGGGTCGTAGTGGAAATTCTTAATGAACCAAAATTGAAAAATCGTGCGAAACTAATCTGTAAATTTATTCAAATTGCGAAATATTGTCTAGAGTTGGGTAATTTTAACTCATTTTTCTCTCTTGTATCTGGATTAGAACATAATCTAATATTACGATTAAAAACAACTTGGGAACTTGTGACACCAAAATCGCTCAAACTCTTTGGTTATCTTAAATCTCTATGTAGTCCTCTCAATAATATGAGCCTTTATCGAGGTTGGCTCATAAAATATTCAGTCAGTAAAAATAGAGATAACAACTCCATAATTATACCTCTTATACCTTTAATTGTAAAAGATTTAACATTCATTAATGATTCCTCAAAAACCATGTTTTCTCAAAACCAATCTTTATCAAAAGCCTTTGAAATGAAAACAAAATTTCCTAGTTTTTTTCTTGATAAACCTTCTCTTTCTTTCGGTCCATATTGTCCTGAGGATAATTCAATCATGCTAGCAAATATCTCCATTGATATTTTAAATTTTACT

Transcript

Protein

Uniprot

Uniprot term	Description
G5EDB9	Rap guanine nucleotide exchange factor OS=Caenorhabditis elegans OX=6239 GN=pxf-1 PE=1 SV=1
F1M386	Rap guanine nucleotide exchange factor 2 OS=Rattus norvegicus OX=10116 GN=Rapgef2 PE=1 SV=2
F1PBJ0	Rap guanine nucleotide exchange factor 2 OS=Canis lupus familiaris OX=9615 GN=RAPGEF2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00617	RasGEF	RasGEF domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023578	Homologous_superfamily	Ras guanine nucleotide exchange factor domain superfamily	Interproscan
IPR001895	Domain	Ras guanine-nucleotide exchange factors catalytic domain	Interproscan
IPR036964	Homologous_superfamily	Ras guanine-nucleotide exchange factor, catalytic domain superfamily	Interproscan
IPR000651	Domain	Ras-like guanine nucleotide exchange factor, N-terminal	Interproscan
IPR008937	Family	Ras-like guanine nucleotide exchange factor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23113	GUANINE NUCLEOTIDE EXCHANGE FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005085	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0007264	Biological Process	small GTPase-mediated signal transduction	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007265	Biological Process	Ras protein signal transduction	Interproscan
GO:0043547	Biological Process	positive regulation of GTPase activity	Interproscan