Gene detail

Detailed information of KAF0990368.1 in Henneguya salminicola

Genomic Location: SGJC01001393.1:4249...5941
NR annotation: KAF0990368.1, hypothetical protein HZS_4202 [Henneguya salminicola]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q05048	Cleavage stimulation factor subunit 1 OS=Homo sapiens OX=9606 GN=CSTF1 PE=1 SV=1
Q5R8K2	Cleavage stimulation factor subunit 1 OS=Pongo abelii OX=9601 GN=CSTF1 PE=2 SV=1
Q8L4J2	Cleavage stimulation factor subunit 50 OS=Arabidopsis thaliana OX=3702 GN=CSTF50 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF16699	CSTF1_dimer	Cleavage stimulation factor subunit 1, dimerisation domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR044633	Family	Cleavage stimulation factor subunit 1-like	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR038184	Homologous_superfamily	CSTF1, dimerization domain superfamily	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR032028	Domain	Cleavage stimulation factor subunit 1, dimerisation domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44133	CLEAVAGE STIMULATION FACTOR SUBUNIT 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005848	Cellular Component	mRNA cleavage stimulating factor complex	Interproscan
GO:0031124	Biological Process	mRNA 3'-end processing	Interproscan