Detailed information of KAF0990690.1 in Henneguya salminicola

Genomic Location: SGJC01001187.1:16...6178
NR annotation: KAF0990690.1, hypothetical protein HZS_5186 [Henneguya salminicola]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q3MHL3Histone-binding protein RBBP4 OS=Bos taurus OX=9913 GN=RBBP4 PE=1 SV=3
Q09028Histone-binding protein RBBP4 OS=Homo sapiens OX=9606 GN=RBBP4 PE=1 SV=3
Q60972Histone-binding protein RBBP4 OS=Mus musculus OX=10090 GN=Rbbp4 PE=1 SV=5
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12265CAF1C_H4-bdHistone-binding protein RBBP4 or subunit C of CAF1 complexRepeatInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR050459FamilyWD repeat RBAP46/RBAP48/MSI1Interproscan
IPR022052DomainHistone-binding protein RBBP4, N-terminalInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22850WD40 REPEAT FAMILYInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0016575Biological Processobsolete histone deacetylationInterproscan
GO:0016581Cellular ComponentNuRD complexInterproscan
GO:0031491Molecular Functionnucleosome bindingInterproscan
GO:0035098Cellular ComponentESC/E(Z) complexInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan

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