Genomic Location: SGJC01000970.1:1498...6760
NR annotation: KAF0991037.1, hypothetical protein HZS_5115 [Henneguya salminicola]
| CDS | |||||
| KAF0991037.1 | |||||
| Transcript |
| - |
| Protein |
| KAF0991037.1 |
| Uniprot term | Description |
|---|---|
| Q3EBC8 | Endoribonuclease Dicer homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At3g03300 PE=1 SV=2 |
| P84634 | Dicer-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=DCL4 PE=1 SV=2 |
| Q9SP32 | Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DCL1 PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00271 | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
| PF03368 | Dicer_dimer | Dicer dimerisation domain | Domain | Interproscan |
| PF00270 | DEAD | DEAD/DEAH box helicase | Domain | Interproscan |
| PF00636 | Ribonuclease_3 | Ribonuclease III domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001650 | Domain | Helicase, C-terminal domain-like | Interproscan |
| IPR000999 | Domain | Ribonuclease III domain | Interproscan |
| IPR005034 | Domain | Dicer dimerisation domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR011545 | Domain | DEAD/DEAH box helicase domain | Interproscan |
| IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR036389 | Homologous_superfamily | Ribonuclease III, endonuclease domain superfamily | Interproscan |
| IPR038248 | Homologous_superfamily | Dicer dimerisation domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14950 | DICER-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004525 | Molecular Function | ribonuclease III activity | Interproscan |
| GO:0006396 | Biological Process | RNA processing | Interproscan |
| GO:0016891 | Molecular Function | RNA endonuclease activity, producing 5'-phosphomonoesters | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K11592 | DICER1, DCR1; endoribonuclease Dicer | EC:3.1.26.- | Chromosome and associated proteins | ko03036 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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