Detailed information of KAF0991329.1 in Henneguya salminicola

Genomic Location: SGJC01000811.1:1117...9511
NR annotation: KAF0991329.1, hypothetical protein HZS_6108, partial [Henneguya salminicola]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A1A5H6CCR4-NOT transcription complex subunit 1 OS=Danio rerio OX=7955 GN=cnot1 PE=2 SV=1
P25655General negative regulator of transcription subunit 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CDC39 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04054Not1CCR4-Not complex component, Not1RepeatInterproscan
PF12842DUF3819CCR4-Not complex, Not1 subunit, domain of unknown function DUF3819DomainInterproscan
PF16418CNOT1_HEATCCR4-NOT transcription complex subunit 1 HEAT repeatDomainInterproscan
PF16415CNOT1_CAF1_bindCCR4-NOT transcription complex subunit 1 CAF1-binding domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007196DomainCCR4-Not complex component, Not1, C-terminalInterproscan
IPR024557DomainCCR4-NOT transcription complex subunit 1, domain 4Interproscan
IPR040398FamilyCCR4-NOT transcription complex subunit 1Interproscan
IPR032194DomainCCR4-NOT transcription complex subunit 1, HEAT repeatInterproscan
IPR032191DomainCCR4-NOT transcription complex subunit 1, CAF1-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13162CCR4-NOT TRANSCRIPTION COMPLEXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000288Biological Processnuclear-transcribed mRNA catabolic process, deadenylation-dependent decayInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0017148Biological Processnegative regulation of translationInterproscan
GO:0030015Cellular ComponentCCR4-NOT core complexInterproscan
GO:0060090Molecular Functionmolecular adaptor activityInterproscan

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